STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0307PFAM: Capsule polysaccharide biosynthesis protein; KEGG: swi:Swit_2453 capsule polysaccharide biosynthesis protein. (577 aa)    
Predicted Functional Partners:
ZMO1467
PFAM: ABC-2 type transporter; KEGG: cak:Caul_2083 ABC-2 type transporter.
 
  
 0.964
ZMO0910
KEGG: swi:Swit_3493 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.960
ZMO0908
PFAM: lipopolysaccharide biosynthesis protein; KEGG: swi:Swit_4014 capsule polysaccharide export-like protein.
 
  
 0.956
ZMO0911
PFAM: polysaccharide export protein; KEGG: swi:Swit_3494 polysaccharide export protein.
 
  
 0.952
ZMO0306
PFAM: glycosyl transferase group 1; KEGG: swi:Swit_4016 glycosyl transferase, group 1.
    0.933
ZMO1922
PFAM: Capsule polysaccharide biosynthesis protein; KEGG: gox:GOX1479 capsule export protein.
   
 0.925
ZMO0909
PFAM: glycosyl transferase group 1; KEGG: swi:Swit_4016 glycosyl transferase, group 1.
    0.902
ZMO1923
PFAM: sulfatase; KEGG: gox:GOX1477 capsule polysaccharide biosynthesis protein.
 
     0.771
ZMO1530
TIGRFAM: KpsF/GutQ family protein; KEGG: swi:Swit_3965 KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.595
ZMO1232
PFAM: glycosyl transferase group 1; KEGG: pol:Bpro_4936 glycosyl transferase, group 1.
  
    0.572
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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