STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0378KEGG: bvi:Bcep1808_1169 hypothetical protein. (168 aa)    
Predicted Functional Partners:
ZMO0379
TIGRFAM: phage terminase, large subunit, PBSX family; KEGG: bbt:BBta_5804 putative phage terminase large subunit.
  
  
 0.900
ZMO0380
KEGG: dac:Daci_1943 hypothetical protein.
       0.634
ZMO0381
Hypothetical protein.
       0.634
ZMO0377
PFAM: HhH-GPD family protein; KEGG: sal:Sala_0844 HhH-GPD.
       0.548
ZMO0383
Hypothetical protein.
       0.420
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.