STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0449KEGG: nar:Saro_0943 hypothetical protein. (254 aa)    
Predicted Functional Partners:
ZMO0452
PFAM: Pyrrolo-quinoline quinone; KEGG: swi:Swit_3125 pyrrolo-quinoline quinone.
       0.780
der
Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.658
ZMO1433
KEGG: swi:Swit_2850 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta.
  
     0.637
ZMO1909
PFAM: protein of unknown function DUF177; KEGG: swi:Swit_1929 hypothetical protein.
  
    0.560
ZMO0763
SMART: Tetratricopeptide domain protein; KEGG: swi:Swit_2758 tetratricopeptide domain-containing protein.
  
     0.542
ZMO0892
SMART: helicase c2; KEGG: swi:Swit_3565 helicase C2.
  
     0.513
ZMO0302
Uncharacterized arylsulfate sulfotransferase-like protein involved in siderophore biosynthesis; KEGG: eli:ELI_12295 hypothetical protein.
  
     0.502
ZMO1676
PFAM: protein of unknown function DUF721; KEGG: swi:Swit_4691 hypothetical protein.
  
     0.489
ZMO0467
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: swi:Swit_2351 hypothetical protein.
  
    0.478
ZMO1304
PFAM: Protein of unknown function DUF1790; KEGG: swi:Swit_4471 hypothetical protein.
  
     0.469
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.