STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0478Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: swi:Swit_4742 two component transcriptional regulator. (239 aa)    
Predicted Functional Partners:
ZMO0480
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE2 domain protein; KEGG: swi:Swit_4740 integral membrane sensor signal transduction histidine kinase.
 
 
 0.983
ZMO0479
PFAM: Peptidoglycan-binding LysM; KEGG: bvi:Bcep1808_1399 peptidoglycan-binding LysM.
 
     0.884
ZMO1323
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: swi:Swit_0401 integral membrane sensor signal transduction histidine kinase.
 
 0.861
ZMO1962
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sal:Sala_1168 histidine kinase.
   0.861
ZMO1176
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gdj:Gdia_2093 integral membrane sensor signal transduction histidine kinase.
 
 
 0.850
ZMO1162
KEGG: swi:Swit_3575 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
 
 0.841
ZMO0258
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: swi:Swit_3443 integral membrane sensor signal transduction histidine kinase.
 
 
 0.782
ZMO0079
PFAM: response regulator receiver; KEGG: cak:Caul_0278 response regulator receiver protein.
  
   0.767
ZMO0250
PFAM: response regulator receiver; KEGG: sal:Sala_3009 response regulator receiver protein.
  
   0.731
ZMO0601
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: swi:Swit_0513 multi-sensor hybrid histidine kinase.
 
 0.715
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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