STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0482Fructose-1,6-bisphosphatase, class II; KEGG: swi:Swit_4732 fructose 1,6-bisphosphatase II; TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein. (332 aa)    
Predicted Functional Partners:
ZMO0176
Transketolase; KEGG: swi:Swit_2601 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; Belongs to the transketolase family.
   
 0.978
pgi
Glucose-6-phosphate isomerase; Provides a gateway for fructose into the Entner-Doudouroff pathway; Belongs to the GPI family.
     
 0.933
frk
PFAM: ROK family protein; KEGG: sde:Sde_2639 fructokinase.
     
 0.933
ZMO0179
KEGG: rce:RC1_1822 fructose-bisphosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase.
     
 0.911
ZMO0481
Hypothetical protein.
       0.762
leuS
KEGG: swi:Swit_2852 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
    0.580
ZMO0483
KEGG: swi:Swit_4731 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding.
  
    0.577
ZMO0085
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: acr:Acry_2705 methyl-accepting chemotaxis sensory transducer.
    
   0.456
ZMO0202
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cak:Caul_0276 methyl-accepting chemotaxis sensory transducer.
    
   0.456
ZMO0882
PFAM: chemotaxis sensory transducer; KEGG: nar:Saro_1430 methyl-accepting chemotaxis sensory transducer.
    
   0.456
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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