Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZMO0487PFAM: HpcH/HpaI aldolase; KEGG: pde:Pden_4110 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (270 aa)    
Predicted Functional Partners:
ZMO0486
KEGG: bcs:BCAN_B0167 hypothetical protein.
 
  
 0.949
ZMO0485
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: azc:AZC_2509 acyl-CoA dehydrogenase.
 
  
 0.781
ZMO0030
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: oca:OCAR_4050 glyoxalase family protein.
  
  
 0.664
ZMO1307
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.575
ZMO0543
TIGRFAM: aconitate hydratase; KEGG: bth:BT_2072 aconitate hydratase; PFAM: aconitate hydratase domain protein.
 
   
 0.507
ZMO0387
KEGG: bbt:BBta_5785 putative phage major head protein.
      
 0.477
ZMO1955
KEGG: aci:ACIAD0166 malate dehydrogenase; PFAM: malic protein domain protein; malic protein NAD-binding.
  
    0.442
ZMO1963
TIGRFAM: citrate synthase I; KEGG: swi:Swit_3212 citrate synthase; PFAM: Citrate synthase; Belongs to the citrate synthase family.
     
 0.434
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
      
 0.406
ZMO0544
KEGG: pdi:BDI_1075 isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase.
     
 0.400
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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