STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0495PFAM: protein of unknown function DUF490; KEGG: swi:Swit_4828 hypothetical protein. (1425 aa)    
Predicted Functional Partners:
ZMO0496
PFAM: surface antigen (D15); KEGG: swi:Swit_4827 surface antigen (D15).
 
 
 0.987
ZMO1174
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: sal:Sala_1562 surface antigen (D15).
 
 
 0.946
gph
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
       0.773
ZMO0228
PFAM: polysaccharide biosynthesis protein; KEGG: swi:Swit_0449 polysaccharide biosynthesis protein.
  
     0.767
ZMO1012
KEGG: swi:Swit_4112 hypothetical protein.
  
     0.748
ZMO0664
KEGG: swi:Swit_4479 hypothetical protein.
  
     0.735
ZMO1319
Hypothetical protein; KEGG: swi:Swit_0407 TPR repeat-containing protein.
  
     0.708
ZMO0803
PFAM: Sporulation domain protein; KEGG: swi:Swit_0604 sporulation domain-containing protein.
  
     0.679
ZMO0019
PFAM: Heparinase II/III family protein; KEGG: swi:Swit_1942 heparinase II/III family protein.
  
     0.673
ZMO0407
PFAM: GcrA cell cycle regulator; KEGG: swi:Swit_4580 GcrA cell cycle regulator.
  
     0.657
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.