node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ZMO0035 | ZMO0565 | ZMO0035 | ZMO0565 | PFAM: Ankyrin; KEGG: swi:Swit_2821 ankyrin. | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; KEGG: swi:Swit_3449 ATP-dependent helicase HrpB; SMART: DEAD-like helicases. | 0.923 |
ZMO0278 | ZMO0565 | ZMO0278 | ZMO0565 | PFAM: 3'-5' exonuclease; KEGG: swi:Swit_2903 3'-5' exonuclease. | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; KEGG: swi:Swit_3449 ATP-dependent helicase HrpB; SMART: DEAD-like helicases. | 0.824 |
ZMO0278 | ZMO1214 | ZMO0278 | ZMO1214 | PFAM: 3'-5' exonuclease; KEGG: swi:Swit_2903 3'-5' exonuclease. | KEGG: swi:Swit_0140 DEAD/DEAH box helicase domain-containing protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; Belongs to the DEAD box helicase family. | 0.510 |
ZMO0278 | ZMO1417 | ZMO0278 | ZMO1417 | PFAM: 3'-5' exonuclease; KEGG: swi:Swit_2903 3'-5' exonuclease. | KEGG: swi:Swit_4724 DEAD/DEAH box helicase domain-containing protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases. | 0.510 |
ZMO0278 | ZMO1798 | ZMO0278 | ZMO1798 | PFAM: 3'-5' exonuclease; KEGG: swi:Swit_2903 3'-5' exonuclease. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.869 |
ZMO0278 | rpsD | ZMO0278 | ZMO1366 | PFAM: 3'-5' exonuclease; KEGG: swi:Swit_2903 3'-5' exonuclease. | RNA-binding S4 domain protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.898 |
ZMO0278 | rpsE | ZMO0278 | ZMO0533 | PFAM: 3'-5' exonuclease; KEGG: swi:Swit_2903 3'-5' exonuclease. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.520 |
ZMO0278 | rpsK | ZMO0278 | ZMO0540 | PFAM: 3'-5' exonuclease; KEGG: swi:Swit_2903 3'-5' exonuclease. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.892 |
ZMO0278 | rpsQ | ZMO0278 | ZMO0525 | PFAM: 3'-5' exonuclease; KEGG: swi:Swit_2903 3'-5' exonuclease. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.814 |
ZMO0565 | ZMO0035 | ZMO0565 | ZMO0035 | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; KEGG: swi:Swit_3449 ATP-dependent helicase HrpB; SMART: DEAD-like helicases. | PFAM: Ankyrin; KEGG: swi:Swit_2821 ankyrin. | 0.923 |
ZMO0565 | ZMO0278 | ZMO0565 | ZMO0278 | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; KEGG: swi:Swit_3449 ATP-dependent helicase HrpB; SMART: DEAD-like helicases. | PFAM: 3'-5' exonuclease; KEGG: swi:Swit_2903 3'-5' exonuclease. | 0.824 |
ZMO0565 | ZMO1214 | ZMO0565 | ZMO1214 | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; KEGG: swi:Swit_3449 ATP-dependent helicase HrpB; SMART: DEAD-like helicases. | KEGG: swi:Swit_0140 DEAD/DEAH box helicase domain-containing protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; Belongs to the DEAD box helicase family. | 0.867 |
ZMO0565 | ZMO1417 | ZMO0565 | ZMO1417 | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; KEGG: swi:Swit_3449 ATP-dependent helicase HrpB; SMART: DEAD-like helicases. | KEGG: swi:Swit_4724 DEAD/DEAH box helicase domain-containing protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases. | 0.867 |
ZMO0565 | ZMO1798 | ZMO0565 | ZMO1798 | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; KEGG: swi:Swit_3449 ATP-dependent helicase HrpB; SMART: DEAD-like helicases. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.950 |
ZMO0565 | fusA | ZMO0565 | ZMO0515 | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; KEGG: swi:Swit_3449 ATP-dependent helicase HrpB; SMART: DEAD-like helicases. | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | 0.863 |
ZMO0565 | rpsD | ZMO0565 | ZMO1366 | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; KEGG: swi:Swit_3449 ATP-dependent helicase HrpB; SMART: DEAD-like helicases. | RNA-binding S4 domain protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.961 |
ZMO0565 | rpsE | ZMO0565 | ZMO0533 | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; KEGG: swi:Swit_3449 ATP-dependent helicase HrpB; SMART: DEAD-like helicases. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.852 |
ZMO0565 | rpsK | ZMO0565 | ZMO0540 | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; KEGG: swi:Swit_3449 ATP-dependent helicase HrpB; SMART: DEAD-like helicases. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.932 |
ZMO0565 | rpsQ | ZMO0565 | ZMO0525 | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; KEGG: swi:Swit_3449 ATP-dependent helicase HrpB; SMART: DEAD-like helicases. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.834 |
ZMO1214 | ZMO0278 | ZMO1214 | ZMO0278 | KEGG: swi:Swit_0140 DEAD/DEAH box helicase domain-containing protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; Belongs to the DEAD box helicase family. | PFAM: 3'-5' exonuclease; KEGG: swi:Swit_2903 3'-5' exonuclease. | 0.510 |