STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0657TIGRFAM: arginine/ornithine succinyltransferase subunit; KEGG: eli:ELI_08920 arginine/ornithine N-succinyltransferase beta subunit; PFAM: arginine N-succinyltransferase beta subunit. (342 aa)    
Predicted Functional Partners:
astB
Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).
 
 
 0.997
ZMO0658
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: swi:Swit_0530 hypothetical protein.
 
     0.957
ZMO1272
Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
  
 0.927
ZMO0432
PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: kpe:KPK_3503 arginase family protein; Belongs to the arginase family.
     
  0.900
argH
KEGG: swi:Swit_2864 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase.
     
 0.800
argD
KEGG: swi:Swit_1409 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
  
 0.644
ZMO0656
PFAM: phosphoribosyltransferase; KEGG: swi:Swit_2486 phosphoribosyltransferase.
       0.561
ZMO1242
PFAM: peptidase M14 carboxypeptidase A; KEGG: swi:Swit_3113 peptidase M14, carboxypeptidase A.
  
     0.499
ZMO1206
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl01_2570 LysR family transcriptional regulator.
  
     0.400
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.