Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZMO0664KEGG: swi:Swit_4479 hypothetical protein. (1046 aa)    
Predicted Functional Partners:
ZMO0666
PFAM: conserved hypothetical protein; KEGG: swi:Swit_4481 hypothetical protein.
 
     0.925
ZMO0228
PFAM: polysaccharide biosynthesis protein; KEGG: swi:Swit_0449 polysaccharide biosynthesis protein.
  
     0.769
ZMO1012
KEGG: swi:Swit_4112 hypothetical protein.
  
     0.759
ZMO0803
PFAM: Sporulation domain protein; KEGG: swi:Swit_0604 sporulation domain-containing protein.
  
     0.746
ZMO1319
Hypothetical protein; KEGG: swi:Swit_0407 TPR repeat-containing protein.
  
     0.742
ZMO0496
PFAM: surface antigen (D15); KEGG: swi:Swit_4827 surface antigen (D15).
 
   0.741
ZMO0495
PFAM: protein of unknown function DUF490; KEGG: swi:Swit_4828 hypothetical protein.
  
     0.735
ZMO1174
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: sal:Sala_1562 surface antigen (D15).
 
   0.728
ZMO1105
PFAM: histidine kinase A domain protein; KEGG: swi:Swit_4568 histidine kinase.
  
     0.715
ZMO0665
KEGG: swi:Swit_4480 hypothetical protein.
       0.694
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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