STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0703PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; dienelactone hydrolase; WD40 domain protein beta Propeller; KEGG: sus:Acid_1826 peptidase S9 prolyl oligopeptidase. (740 aa)    
Predicted Functional Partners:
ZMO0704
PFAM: AMP-dependent synthetase and ligase; KEGG: swi:Swit_2559 acyl-CoA synthetase.
       0.529
ZMO0145
PFAM: peptidase M28; KEGG: gdj:Gdia_1817 peptidase M28.
 
    0.521
ZMO0794
KEGG: ccr:CC_3688 prolyl oligopeptidase family protein; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller.
  
    0.449
ZMO1273
PFAM: Amidohydrolase 3; KEGG: swi:Swit_2396 amidohydrolase 3.
 
     0.417
ZMO0912
PFAM: protein of unknown function DUF885; KEGG: pzu:PHZ_c0713 hypothetical protein.
  
    0.411
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.