STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0740PFAM: CsbD family protein; KEGG: rpc:RPC_1353 CsbD-like; Belongs to the UPF0337 (CsbD) family. (90 aa)    
Predicted Functional Partners:
ZMO0994
KEGG: hypothetical protein.
  
    0.770
ZMO0934
Hypothetical protein.
      
 0.753
ZMO0918
Catalase; KEGG: psp:PSPPH_4565 catalase KatA; PFAM: Catalase domain protein; Belongs to the catalase family.
  
  
 0.609
ZMO2034
KEGG: aav:Aave_0683 putative lipoprotein.
      
 0.598
sacB
Levansucrase; KEGG: gox:GOX0873 levansucrase; PFAM: glycoside hydrolase family 68.
      
 0.510
ZMO0693
PFAM: OsmC family protein; KEGG: mrd:Mrad2831_2850 OsmC family protein.
   
  
 0.492
ZMO1754
PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_B2363 putative aldehyde dehydrogenase.
   
  
 0.491
ZMO1289
PFAM: Transglycosylase-associated protein; KEGG: smt:Smal_3969 transglycosylase-associated protein.
  
    0.484
ZMO0911
PFAM: polysaccharide export protein; KEGG: swi:Swit_3494 polysaccharide export protein.
   
    0.482
ZMO0739
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rme:Rmet_4862 antibiotic biosynthesis monooxygenase.
  
    0.481
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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