STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0763SMART: Tetratricopeptide domain protein; KEGG: swi:Swit_2758 tetratricopeptide domain-containing protein. (341 aa)    
Predicted Functional Partners:
ZMO0764
KEGG: sal:Sala_0687 alpha/beta hydrolase fold.
       0.777
ZMO1255
PFAM: cytochrome c assembly protein; KEGG: swi:Swit_3990 cytochrome c assembly protein.
  
 
 0.720
ZMO1434
Hypothetical protein; KEGG: swi:Swit_2851 secreted (periplasmic)-like protein.
  
     0.619
ZMO0892
SMART: helicase c2; KEGG: swi:Swit_3565 helicase C2.
  
     0.617
ZMO1312
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: swi:Swit_0410 PpiC-type peptidyl-prolyl cis-trans isomerase.
  
     0.617
ZMO1319
Hypothetical protein; KEGG: swi:Swit_0407 TPR repeat-containing protein.
  
     0.606
ZMO0664
KEGG: swi:Swit_4479 hypothetical protein.
  
     0.605
ZMO1436
KEGG: nar:Saro_3214 hypothetical protein.
  
     0.601
ZMO0760
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rce:RC1_0598 lactoylglutathione lyase.
       0.599
ZMO1425
PFAM: thiamine monophosphate synthase; KEGG: swi:Swit_2855 thiamine monophosphate synthase.
  
     0.593
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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