STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0786Hypothetical protein; KEGG: yen:YE1370A putative dehydrogenase subunit. (186 aa)    
Predicted Functional Partners:
ZMO0787
PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: spe:Spro_2333 glucose-methanol-choline oxidoreductase.
   
   0.832
ZMO0788
Gluconate 2-dehydrogenase (acceptor); KEGG: bur:Bcep18194_C7344 cytochrome c, class I; PFAM: cytochrome c class I.
   
   0.798
ZMO1285
PFAM: glucose-methanol-choline oxidoreductase; KEGG: bid:Bind_3801 glucose-methanol-choline oxidoreductase.
   
   0.601
ZMO0961
PFAM: cytochrome c class I; KEGG: gdj:Gdia_0037 cytochrome c class I.
   
   0.542
ZMO1284
KEGG: bid:Bind_3802 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I.
   
   0.542
ZMO0785
Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
       0.442
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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