STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0797PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cak:Caul_3390 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (261 aa)    
Predicted Functional Partners:
ZMO0456
PFAM: ferredoxin; KEGG: xcv:XCV0319 putative vanillate O-demethylase oxidoreductase.
   
   0.459
ZMO0860
PFAM: ferredoxin; KEGG: acr:Acry_1765 ferredoxin.
   
   0.459
ZMO0035
PFAM: Ankyrin; KEGG: swi:Swit_2821 ankyrin.
   
 0.458
ZMO1818
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: met:M446_3601 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
    
   0.455
ZMO1223
KEGG: swi:Swit_0086 [acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase.
 
 
 0.452
ZMO1278
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.449
ZMO0800
KEGG: bvi:Bcep1808_6171 ABC transporter related; PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase.
  
  
 0.437
ZMO0798
KEGG: bmu:Bmul_5748 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
       0.432
ZMO0799
PFAM: ABC-2 type transporter; KEGG: bmj:BMULJ_05773 ABC-2 type transport system permease protein.
       0.432
ZMO0801
PFAM: secretion protein HlyD family protein; KEGG: bmj:BMULJ_05771 HlyD family secretion protein.
       0.432
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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