STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0800KEGG: bvi:Bcep1808_6171 ABC transporter related; PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase. (922 aa)    
Predicted Functional Partners:
ZMO0801
PFAM: secretion protein HlyD family protein; KEGG: bmj:BMULJ_05771 HlyD family secretion protein.
  
 0.962
ZMO0799
PFAM: ABC-2 type transporter; KEGG: bmj:BMULJ_05773 ABC-2 type transport system permease protein.
 
 
0.945
ZMO0798
KEGG: bmu:Bmul_5748 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
 
   
 0.919
ZMO2008
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO0100 peptide/opine/nickel uptake ABC transporter permease.
  
  
 0.866
ZMO1856
PFAM: major facilitator superfamily MFS_1; KEGG: gdj:Gdia_1718 major facilitator superfamily MFS_1.
     
 0.752
ZMO1288
PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_3360 major facilitator transporter.
     
 0.741
ZMO0982
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr1189 permease protein of oligopeptide ABC transporter.
 
  
 0.704
ZMO0143
KEGG: swi:Swit_1926 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
0.634
ZMO0678
PFAM: nitroreductase; KEGG: bxe:Bxe_C0111 putative nitroreductase.
  
  
 0.593
ZMO1029
KEGG: btl:BALH_1667 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
0.574
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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