STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0803PFAM: Sporulation domain protein; KEGG: swi:Swit_0604 sporulation domain-containing protein. (544 aa)    
Predicted Functional Partners:
ZMO0228
PFAM: polysaccharide biosynthesis protein; KEGG: swi:Swit_0449 polysaccharide biosynthesis protein.
  
     0.768
ZMO0664
KEGG: swi:Swit_4479 hypothetical protein.
  
     0.746
ZMO1319
Hypothetical protein; KEGG: swi:Swit_0407 TPR repeat-containing protein.
 
     0.738
ZMO1012
KEGG: swi:Swit_4112 hypothetical protein.
  
     0.713
ZMO0495
PFAM: protein of unknown function DUF490; KEGG: swi:Swit_4828 hypothetical protein.
  
     0.679
ZMO1959
Hypothetical protein; KEGG: eli:ELI_06575 ATPase.
 
     0.652
ZMO1434
Hypothetical protein; KEGG: swi:Swit_2851 secreted (periplasmic)-like protein.
  
     0.648
ZMO1607
PFAM: Septum formation initiator; KEGG: swi:Swit_1221 septum formation initiator.
  
    0.648
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.647
ZMO1312
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: swi:Swit_0410 PpiC-type peptidyl-prolyl cis-trans isomerase.
  
   0.603
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.