STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0847PFAM: Carbohydrate-selective porin OprB; KEGG: rso:RSp1632 putative porin B precursor outer (glucose porin) transmembrane protein. (628 aa)    
Predicted Functional Partners:
ZMO0064
PFAM: Carbohydrate-selective porin OprB; KEGG: bid:Bind_2156 carbohydrate-selective porin OprB.
  
  
 
0.677
ZMO1859
PFAM: Carbohydrate-selective porin OprB; KEGG: mpo:Mpop_1190 carbohydrate-selective porin OprB.
  
  
 
0.676
ZMO1354
PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: swi:Swit_0853 OmpA/MotB domain-containing protein.
     
 0.591
ZMO1432
PFAM: Fusaric acid resistance protein conserved region; KEGG: bpt:Bpet2606 hypothetical protein.
  
     0.576
ZMO1380
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: eta:ETA_25520 AraC family transcriptional regulator.
  
     0.554
ZMO0978
PFAM: periplasmic binding protein; KEGG: swi:Swit_0259 periplasmic binding protein.
      
 0.457
ZMO1085
KEGG: bph:Bphy_3253 cellulose synthase domain-containing protein; PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein.
  
    0.451
ZMO1430
Efflux transporter, RND family, MFP subunit; KEGG: swi:Swit_3168 secretion protein HlyD family protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.419
ZMO1848
PFAM: periplasmic binding protein; KEGG: bid:Bind_2004 putative ABC-type Fe3+ transport system periplasmic component.
      
 0.416
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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