STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0889Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (384 aa)    
Predicted Functional Partners:
glk
TIGRFAM: glucokinase; KEGG: gdj:Gdia_3540 glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family.
     
 0.903
gnl
Gluconolactonase; Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present.
     0.732
ZMO1683
TIGRFAM: L-asparaginase, type II; KEGG: bps:BPSS2060 L-asparaginase; PFAM: Asparaginase/glutaminase; Belongs to the asparaginase 1 family.
      
 0.569
sacA
SMART: glycoside hydrolase family 32; TIGRFAM: sucrose-6-phosphate hydrolase; KEGG: eta:ETA_18900 sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein.
  
   
 0.551
pdhB
Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).
   
  
 0.508
sacC
Levansucrase; KEGG: gox:GOX0873 levansucrase; PFAM: glycoside hydrolase family 68; Belongs to the glycosyl hydrolase 68 family.
      
 0.458
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
   
  
 0.452
ZMO0888
PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: lpn:lpg2573 transposase (resolvase, DNA invertase).
       0.433
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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