STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0904Beta-galactosidase; KEGG: sma:SAV_5756 beta-galactosidase; PFAM: glycoside hydrolase family 35; Belongs to the glycosyl hydrolase 35 family. (1033 aa)    
Predicted Functional Partners:
ZMO0992
PFAM: peptidase S10 serine carboxypeptidase; KEGG: bxe:Bxe_B1174 putative carboxypeptidase-related protein.
    
  0.590
ZMO1291
PFAM: peptidase S10 serine carboxypeptidase; KEGG: gdj:Gdia_3304 peptidase S10 serine carboxypeptidase.
    
  0.590
ZMO0035
PFAM: Ankyrin; KEGG: swi:Swit_2821 ankyrin.
   
 0.585
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
 
     0.472
ZMO0654
KEGG: swi:Swit_2751 polysaccharide deacetylase; PFAM: glycosyl transferase family 2; polysaccharide deacetylase; SMART: chitinase II.
 
  
 0.449
ZMO0905
Periplasmic glucan biosynthesis protein MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
       0.409
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.