STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0905Periplasmic glucan biosynthesis protein MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (523 aa)    
Predicted Functional Partners:
ZMO0907
PFAM: glycosyl transferase family 2; KEGG: swi:Swit_3489 glucosyltransferase MdoH.
  
 0.944
ZMO0031
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_3048 TonB-dependent receptor.
      
 0.579
ZMO1681
KEGG: dac:Daci_3913 YidE/YbjL domain-containing protein; TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein.
   
  
 0.578
ZMO1449
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: bch:Bcen2424_4641 mannitol dehydrogenase domain-containing protein.
      
 0.577
ZMO1181
PFAM: N-formylglutamate amidohydrolase; KEGG: swi:Swit_4642 N-formylglutamate amidohydrolase.
      
 0.569
ZMO1344
PFAM: aldo/keto reductase; KEGG: bcl:ABC3477 2,5-didehydrogluconate reductase.
      
 0.526
ZMO0918
Catalase; KEGG: psp:PSPPH_4565 catalase KatA; PFAM: Catalase domain protein; Belongs to the catalase family.
      
 0.457
cysD
KEGG: eca:ECA3543 sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase.
      
 0.452
ZMO0904
Beta-galactosidase; KEGG: sma:SAV_5756 beta-galactosidase; PFAM: glycoside hydrolase family 35; Belongs to the glycosyl hydrolase 35 family.
       0.409
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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