STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0908PFAM: lipopolysaccharide biosynthesis protein; KEGG: swi:Swit_4014 capsule polysaccharide export-like protein. (388 aa)    
Predicted Functional Partners:
ZMO0910
KEGG: swi:Swit_3493 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.998
ZMO1467
PFAM: ABC-2 type transporter; KEGG: cak:Caul_2083 ABC-2 type transporter.
 
 
 0.995
ZMO0911
PFAM: polysaccharide export protein; KEGG: swi:Swit_3494 polysaccharide export protein.
 
  
 0.984
ZMO0307
PFAM: Capsule polysaccharide biosynthesis protein; KEGG: swi:Swit_2453 capsule polysaccharide biosynthesis protein.
 
  
 0.956
ZMO0909
PFAM: glycosyl transferase group 1; KEGG: swi:Swit_4016 glycosyl transferase, group 1.
 
    0.914
ZMO1922
PFAM: Capsule polysaccharide biosynthesis protein; KEGG: gox:GOX1479 capsule export protein.
 
 
 
 0.844
ZMO0306
PFAM: glycosyl transferase group 1; KEGG: swi:Swit_4016 glycosyl transferase, group 1.
 
    0.783
ZMO1923
PFAM: sulfatase; KEGG: gox:GOX1477 capsule polysaccharide biosynthesis protein.
 
     0.742
ZMO1232
PFAM: glycosyl transferase group 1; KEGG: pol:Bpro_4936 glycosyl transferase, group 1.
 
    0.698
ZMO0740
PFAM: CsbD family protein; KEGG: rpc:RPC_1353 CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.478
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.