STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0926PFAM: Mammalian cell entry related domain protein; KEGG: swi:Swit_2554 hypothetical protein. (169 aa)    
Predicted Functional Partners:
ZMO1591
PFAM: protein of unknown function DUF140; KEGG: swi:Swit_0014 hypothetical protein.
 
 0.995
ZMO1590
KEGG: swi:Swit_0015 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.992
ZMO1018
PFAM: protein of unknown function DUF140; KEGG: swi:Swit_2742 hypothetical protein.
 
 0.986
ZMO1017
KEGG: swi:Swit_2743 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.977
ZMO1612
PFAM: toluene tolerance family protein; KEGG: swi:Swit_0442 toluene tolerance family protein.
 
 0.971
ZMO0876
KEGG: rru:Rru_A0056 toluene tolerance; TIGRFAM: hopanoid biosynthesis associated membrane protein HpnM; PFAM: toluene tolerance family protein.
 
 0.939
ZMO1016
PFAM: Mammalian cell entry related domain protein; KEGG: swi:Swit_2744 hypothetical protein.
     
 0.903
ZMO1749
PFAM: VacJ family lipoprotein; KEGG: swi:Swit_2403 VacJ family lipoprotein.
 
   
 0.827
ZMO2007
KEGG: eli:ELI_11125 hypothetical protein.
       0.813
ZMO0602
PFAM: OmpA/MotB domain protein; KEGG: swi:Swit_1259 OmpA/MotB domain-containing protein.
 
 
   0.582
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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