STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0930Hypothetical protein. (142 aa)    
Predicted Functional Partners:
ZMO0931
Hypothetical protein.
     
 0.900
ZMO0932
PFAM: protein of unknown function DUF847; KEGG: bph:Bphy_7163 hypothetical protein.
     
 0.852
ZMO0934
Hypothetical protein.
     
 0.742
ZMO0929
Hypothetical protein.
      
 0.579
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
      
 0.577
ZMO1699
KEGG: swi:Swit_3788 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase.
      
 0.577
ZMO1862
KEGG: kpe:KPK_1106 HAD-superfamily hydrolase, subfamily IA.
      
 0.577
ZMO0101
PFAM: NAD-dependent epimerase/dehydratase; KEGG: gox:GOX0911 putative oxidoreductase.
      
 0.457
ZMO1334
PFAM: YceI family protein; KEGG: gdj:Gdia_2180 YceI family protein; Belongs to the UPF0312 family.
      
 0.457
sacA
SMART: glycoside hydrolase family 32; TIGRFAM: sucrose-6-phosphate hydrolase; KEGG: eta:ETA_18900 sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein.
      
 0.455
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.