STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0937Aromatic-amino-acid transaminase; KEGG: swi:Swit_0763 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II. (407 aa)    
Predicted Functional Partners:
ZMO0560
PFAM: aminotransferase class I and II; KEGG: sus:Acid_3339 aminotransferase.
   
 
 0.946
ZMO0563
KEGG: swi:Swit_3447 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase.
    
 0.939
ZMO1678
KEGG: swi:Swit_4688 prephenate dehydratase; PFAM: prephenate dehydratase.
    
 0.939
ZMO0342
PFAM: aminotransferase class I and II; KEGG: swi:Swit_3551 aminotransferase.
   
 0.920
tyrC
Arogenate dehydrogenase; Can function as either prephenate dehydrogenase or as arogenate dehydrogenase in the biosynthesis of L-tyrosine. Catalyzes two analogous reactions: converts prephenate to 4-hydroxyphenylpyruvate and transforms L-arogenate to L-tyrosine. Is not able to utilize NADP(+) instead of NAD(+) as cosubstrate.
    
 0.917
metE
5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
     
 0.913
ZMO1745
TIGRFAM: methionine synthase; KEGG: swi:Swit_2399 methionine synthase (B12-dependent); PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein.
     
 0.910
ZMO0002
PFAM: aminotransferase class I and II; KEGG: bra:BRADO4744 putative histidinol-phosphate aminotransferase (HisC-like).
   
 
 0.905
hisC
Histidinol-phosphate aminotransferase; Catalyzes the conversion of imidazole acetol phosphate to histidinol phosphate. Can also transaminate aromatic amino acids and histidine in addition to histidinol phosphate. Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.905
ZMO0562
PFAM: aminotransferase class I and II; KEGG: sus:Acid_4459 aminotransferase.
   
 
 0.905
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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