STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoDType I phosphodiesterase/nucleotide pyrophosphatase; Alkaline phosphatase with broad substrate specificity. Has phosphatase activity towards nucleotide and sugar phosphates with a preference to nucleotide phosphates. Has no phosphodiesterase activity. (576 aa)    
Predicted Functional Partners:
ZMO0664
KEGG: swi:Swit_4479 hypothetical protein.
  
     0.614
ZMO0114
KEGG: mpo:Mpop_4378 glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I.
      
 0.580
ZMO0962
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: ccr:CC_0534 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase.
      
 0.573
ZMO0113
TIGRFAM: para-aminobenzoate synthase, subunit I; KEGG: met:M446_0053 para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like.
      
 0.569
ZMO0563
KEGG: swi:Swit_3447 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase.
      
 0.568
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
      
 0.568
ZMO1593
PFAM: peptidase M61 domain protein; KEGG: swi:Swit_0105 peptidase M61 domain-containing protein.
  
     0.534
ZMO1167
PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: cak:Caul_3451 peptidase S15.
  
     0.529
ZMO0228
PFAM: polysaccharide biosynthesis protein; KEGG: swi:Swit_0449 polysaccharide biosynthesis protein.
  
     0.490
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.
      
 0.459
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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