STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0957Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (418 aa)    
Predicted Functional Partners:
ZMO0956
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.999
ZMO0958
PFAM: cytochrome c1; KEGG: swi:Swit_1394 cytochrome c1.
 0.999
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
  
  
 0.987
ZMO1818
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: met:M446_3601 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
 
 0.969
ZMO0788
Gluconate 2-dehydrogenase (acceptor); KEGG: bur:Bcep18194_C7344 cytochrome c, class I; PFAM: cytochrome c class I.
  
 
 0.930
ZMO0961
PFAM: cytochrome c class I; KEGG: gdj:Gdia_0037 cytochrome c class I.
  
 
 0.930
ZMO1284
KEGG: bid:Bind_3802 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I.
  
 
 0.930
ZMO1422
PFAM: peptidase M16 domain protein; KEGG: swi:Swit_3129 peptidase M16 domain-containing protein.
    
 0.905
ZMO1423
PFAM: peptidase M16 domain protein; KEGG: swi:Swit_3129 peptidase M16 domain-containing protein.
    
 0.905
ZMO1890
KEGG: swi:Swit_1414 processing peptidase; PFAM: peptidase M16 domain protein.
    
 0.905
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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