STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0976PFAM: aldo/keto reductase; KEGG: pap:PSPA7_4242 oxidoreductase. (340 aa)    
Predicted Functional Partners:
ZMO1771
PFAM: iron-containing alcohol dehydrogenase; KEGG: sbm:Shew185_0263 iron-containing alcohol dehydrogenase.
  
  
 0.620
gfo
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: npu:Npun_F5032 oxidoreductase domain-containing protein; Belongs to the Gfo/Idh/MocA family.
  
  
 0.589
ZMO1993
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: swi:Swit_2841 alcohol dehydrogenase.
  
  
 0.519
adhA
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ecg:E2348_C_1612 alcohol dehydrogenase, 1-propanol preferring.
     
 0.492
ZMO0978
PFAM: periplasmic binding protein; KEGG: swi:Swit_0259 periplasmic binding protein.
       0.485
ZMO1773
PFAM: aldo/keto reductase; KEGG: xau:Xaut_4255 aldo/keto reductase.
 
 
0.479
adhB
PFAM: iron-containing alcohol dehydrogenase; KEGG: pmr:PMI0657 probable alcohol dehydrogenase.
   
  
 0.470
ddh
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: npu:Npun_F2517 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
   
  
 0.460
ZMO1934
PFAM: N-6 DNA methylase; protein of unknown function DUF450; KEGG: gbm:Gbem_3247 N-6 DNA methylase.
      
 0.456
hfq
RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.
      
 0.453
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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