STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1018PFAM: protein of unknown function DUF140; KEGG: swi:Swit_2742 hypothetical protein. (366 aa)    
Predicted Functional Partners:
ZMO1017
KEGG: swi:Swit_2743 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.999
ZMO1016
PFAM: Mammalian cell entry related domain protein; KEGG: swi:Swit_2744 hypothetical protein.
 
 0.998
ZMO1590
KEGG: swi:Swit_0015 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.987
ZMO0926
PFAM: Mammalian cell entry related domain protein; KEGG: swi:Swit_2554 hypothetical protein.
 
 0.986
ZMO1591
PFAM: protein of unknown function DUF140; KEGG: swi:Swit_0014 hypothetical protein.
  
  
 
0.921
ZMO0876
KEGG: rru:Rru_A0056 toluene tolerance; TIGRFAM: hopanoid biosynthesis associated membrane protein HpnM; PFAM: toluene tolerance family protein.
  
 
 0.821
ZMO1612
PFAM: toluene tolerance family protein; KEGG: swi:Swit_0442 toluene tolerance family protein.
  
 
 0.821
ZMO1015
PFAM: protein of unknown function DUF330; KEGG: eli:ELI_01315 hypothetical protein.
  
    0.811
ZMO1790
KEGG: sal:Sala_1985 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.
  
   0.601
ZMO0910
KEGG: swi:Swit_3493 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
      
 0.599
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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