STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1065KEGG: sal:Sala_0209 phage shock protein C, PspC; TIGRFAM: phage shock protein C; PFAM: PspC domain protein. (127 aa)    
Predicted Functional Partners:
ZMO1063
KEGG: swi:Swit_2937 phage shock protein A, PspA; TIGRFAM: phage shock protein A; PFAM: PspA/IM30 family protein.
 
 
 0.999
ZMO1064
TIGRFAM: phage shock protein B; KEGG: swi:Swit_2938 phage shock B family protein.
     
 0.907
ZMO1062
Hypothetical protein.
     
 0.875
ZMO1061
Sigma54 specific transcriptional acivator, PspF, Fis family; TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; KEGG: swi:Swit_2936 sigma-54 dependent trancsriptional regulator; SMART: AAA ATPase.
 
   
 0.862
ZMO0234
TIGRFAM: protease Do; KEGG: swi:Swit_2354 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family.
   
  
 0.534
ZMO1522
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_3144 TonB-dependent receptor.
  
     0.502
ZMO1563
PFAM: protein of unknown function DUF481; KEGG: swi:Swit_3855 hypothetical protein.
  
     0.471
ZMO1060
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.420
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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