STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1085KEGG: bph:Bphy_3253 cellulose synthase domain-containing protein; PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein. (1336 aa)    
Predicted Functional Partners:
ZMO1083
TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); KEGG: ent:Ent638_3940 cellulose synthase (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ.
 
  
 0.975
ZMO1084
Cellulose synthase subunit B; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
  
 0.961
ZMO1086
Cellulase; KEGG: eta:ETA_33880 minor endoglucanase Y precursor (endo-1,4-beta-glucanase Y); PFAM: glycoside hydrolase family 8; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
 
   
 0.903
ZMO1081
KEGG: ent:Ent638_3941 hypothetical protein.
       0.809
ZMO1082
Hypothetical protein.
       0.773
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  
 0.749
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
  
    0.741
ZMO1859
PFAM: Carbohydrate-selective porin OprB; KEGG: mpo:Mpop_1190 carbohydrate-selective porin OprB.
  
    0.712
ZMO0654
KEGG: swi:Swit_2751 polysaccharide deacetylase; PFAM: glycosyl transferase family 2; polysaccharide deacetylase; SMART: chitinase II.
  
  
 0.614
ZMO1080
Hypothetical protein.
       0.608
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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