STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1102Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: swi:Swit_2675 PAS/PAC sensor signal transduction histidine kinase. (795 aa)    
Predicted Functional Partners:
pdhB
Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).
   
 0.989
ZMO0601
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: swi:Swit_0513 multi-sensor hybrid histidine kinase.
 
 
 
 0.972
ZMO1101
PFAM: protein of unknown function UPF0079; KEGG: swi:Swit_2676 hypothetical protein.
      0.939
ZMO0250
PFAM: response regulator receiver; KEGG: sal:Sala_3009 response regulator receiver protein.
 
 
 
 0.884
ZMO1387
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: eli:ELI_14230 DNA-binding response regulator CtrA.
 
 
 0.844
ZMO1105
PFAM: histidine kinase A domain protein; KEGG: swi:Swit_4568 histidine kinase.
 
     0.841
ZMO0257
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: swi:Swit_3444 two component transcriptional regulator.
 
 
 0.832
ZMO1164
KEGG: swi:Swit_3577 two component transcriptional regulator; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein.
 
 
 0.794
ZMO1099
TIGRFAM: double-strand break repair protein AddB; KEGG: swi:Swit_2680 double-strand break repair protein AddB.
 
     0.792
ZMO1962
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sal:Sala_1168 histidine kinase.
  
 
 0.770
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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