STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuBABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (240 aa)    
Predicted Functional Partners:
ZMO1262
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0600 nitrate/sulfonate/bicarbonate ABC transporter permease.
 
 0.999
ZMO1261
SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_C7086 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein.
 
 0.997
ZMO1790
KEGG: sal:Sala_1985 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.
 
    
0.808
ZMO1264
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sec:SC3751 mandelate racemase/muconate lactonizing family protein.
      0.663
ZMO1265
PFAM: Protein of unknown function DUF1847; KEGG: dsy:DSY3415 hypothetical protein.
       0.638
ZMO1462
PFAM: NMT1/THI5 like domain protein; KEGG: sma:SAV_1337 ABC transporter substrate-binding protein.
  
  
 0.588
ZMO1260
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdj:Gdia_2919 TonB-dependent receptor.
  
    0.454
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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