STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1304PFAM: Protein of unknown function DUF1790; KEGG: swi:Swit_4471 hypothetical protein. (169 aa)    
Predicted Functional Partners:
ZMO1545
PFAM: heat shock protein DnaJ domain protein; KEGG: swi:Swit_2332 heat shock protein DnaJ domain-containing protein.
  
     0.723
ZMO1099
TIGRFAM: double-strand break repair protein AddB; KEGG: swi:Swit_2680 double-strand break repair protein AddB.
  
     0.707
ZMO1305
PFAM: protein of unknown function DUF526; KEGG: swi:Swit_4470 hypothetical protein.
 
     0.695
proC-2
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.681
ZMO0555
PFAM: protein of unknown function DUF448; KEGG: swi:Swit_3817 hypothetical protein.
  
     0.661
ZMO0417
KEGG: nar:Saro_0700 hypothetical protein.
  
     0.639
ZMO1504
PFAM: protein of unknown function DUF1321; KEGG: swi:Swit_2716 hypothetical protein.
  
     0.636
ZMO1908
PFAM: SmpA/OmlA domain protein; KEGG: swi:Swit_1931 SmpA/OmlA domain-containing protein.
  
     0.610
ZMO0302
Uncharacterized arylsulfate sulfotransferase-like protein involved in siderophore biosynthesis; KEGG: eli:ELI_12295 hypothetical protein.
  
     0.593
ZMO0988
PFAM: protein of unknown function DUF465; KEGG: swi:Swit_0634 hypothetical protein.
  
     0.586
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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