STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1305PFAM: protein of unknown function DUF526; KEGG: swi:Swit_4470 hypothetical protein. (71 aa)    
Predicted Functional Partners:
ZMO1304
PFAM: Protein of unknown function DUF1790; KEGG: swi:Swit_4471 hypothetical protein.
 
     0.695
ZMO1319
Hypothetical protein; KEGG: swi:Swit_0407 TPR repeat-containing protein.
  
     0.661
ZMO1717
KEGG: sal:Sala_0808 TonB-like protein; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein.
  
     0.615
ZMO1306
Hemolysin A; KEGG: swi:Swit_4468 hemolysin A; TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ.
       0.599
ZMO0228
PFAM: polysaccharide biosynthesis protein; KEGG: swi:Swit_0449 polysaccharide biosynthesis protein.
  
     0.595
ZMO0277
PFAM: protein of unknown function DUF1239; KEGG: swi:Swit_2904 hypothetical protein.
  
     0.555
proC-2
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.506
ZMO1959
Hypothetical protein; KEGG: eli:ELI_06575 ATPase.
  
     0.490
ZMO0019
PFAM: Heparinase II/III family protein; KEGG: swi:Swit_1942 heparinase II/III family protein.
  
     0.454
yacG
Hypothetical protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.
  
     0.440
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.