STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1442KEGG: swi:Swit_1806 hypothetical protein. (299 aa)    
Predicted Functional Partners:
ZMO1849
KEGG: gox:GOX0940 hypothetical protein.
  
    0.733
nusB
NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
  
  
 0.731
ZMO1443
PFAM: polysaccharide biosynthesis protein; KEGG: gox:GOX0796 hypothetical protein.
 
     0.703
ZMO1568
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1347 TonB-dependent outer membrane receptor.
  
     0.671
ZMO1463
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1347 TonB-dependent outer membrane receptor.
  
     0.668
ZMO0017
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: swi:Swit_1940 Fmu (Sun) domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
  
 0.628
ZMO1320
PFAM: Fmu (Sun) domain protein; KEGG: swi:Swit_0406 Fmu (Sun) domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
  
 0.628
ZMO1458
KEGG: gox:GOX2142 hypothetical protein.
  
     0.626
ZMO0128
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1017 TonB-dependent outer membrane receptor.
  
     0.577
ZMO0789
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1017 TonB-dependent outer membrane receptor.
  
     0.576
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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