STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1544TIGRFAM: cobalt chelatase, pCobS small subunit; KEGG: swi:Swit_2331 hydrogenobyrinic acid a,c-diamide cobaltochelatase; PFAM: ATPase associated with various cellular activities AAA_5. (327 aa)    
Predicted Functional Partners:
ZMO1543
TIGRFAM: cobalt chelatase, pCobT subunit; KEGG: swi:Swit_2329 cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit.
 
 
 0.996
ZMO1495
KEGG: swi:Swit_3108 ATP:cob(I)alamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
     
  0.900
ZMO1545
PFAM: heat shock protein DnaJ domain protein; KEGG: swi:Swit_2332 heat shock protein DnaJ domain-containing protein.
 
     0.864
ZMO1955
KEGG: aci:ACIAD0166 malate dehydrogenase; PFAM: malic protein domain protein; malic protein NAD-binding.
   
    0.482
ZMO1547
PFAM: regulatory protein TetR; KEGG: mrd:Mrad2831_0286 TetR family transcriptional regulator.
  
    0.477
ZMO1548
TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; KEGG: bbt:BBta_1355 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase.
       0.473
ZMO1099
TIGRFAM: double-strand break repair protein AddB; KEGG: swi:Swit_2680 double-strand break repair protein AddB.
 
    0.401
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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