STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1574Transcriptional regulator, LysR family; KEGG: azc:AZC_3272 regulatory protein; PFAM: regulatory protein LysR; LysR substrate-binding; Belongs to the LysR transcriptional regulatory family. (304 aa)    
Predicted Functional Partners:
ZMO1577
PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_3277 major facilitator transporter.
     0.729
ZMO0774
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: swi:Swit_3530 LysR family transcriptional regulator.
  
     0.664
ZMO1579
KEGG: hydrolases of the alpha/beta superfamily; K06889.
 
    0.589
ZMO1576
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:pRL120546 putative short-chain dehydrogenase/oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.547
ZMO1117
KEGG: swi:Swit_0657 glutamate synthase (NADPH) large subunit; PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase.
  
  
 0.514
ZMO1733
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: swi:Swit_3588 LysR family transcriptional regulator.
  
     0.512
ZMO1573
Dyp-type peroxidase family; KEGG: gox:GOX0528 putative iron-dependent peroxidase; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase.
       0.503
ZMO0675
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: swi:Swit_1196 LysR family transcriptional regulator.
  
     0.430
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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