STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1576PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:pRL120546 putative short-chain dehydrogenase/oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (248 aa)    
Predicted Functional Partners:
ZMO1399
PFAM: fatty acid hydroxylase; KEGG: swi:Swit_3907 fatty acid hydroxylase.
      
 0.599
ZMO1984
PFAM: aldo/keto reductase; KEGG: xfa:XF1724 sugar-phosphate dehydrogenase.
  
  
 0.552
ZMO1574
Transcriptional regulator, LysR family; KEGG: azc:AZC_3272 regulatory protein; PFAM: regulatory protein LysR; LysR substrate-binding; Belongs to the LysR transcriptional regulatory family.
 
     0.547
ZMO0020
PFAM: protein of unknown function DUF162; KEGG: gox:GOX1358 hypothetical protein.
   
  
 0.545
ZMO0021
PFAM: protein of unknown function DUF162; KEGG: gox:GOX1357 putative electron transport protein.
   
  
 0.536
ZMO1696
KEGG: bid:Bind_0951 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
 
   
 0.525
ZMO1578
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: npu:Npun_R0578 short-chain dehydrogenase/reductase SDR.
 
   
0.517
ZMO1949
KEGG: ppg:PputGB1_2187 ribosyldihydronicotinamide dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone).
   
  
 0.503
ZMO1301
Hypothetical protein; KEGG: fjo:Fjoh_0346 WavE lipopolysaccharide synthesis.
  
    0.483
ZMO1254
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: swi:Swit_3991 periplasmic protein thiol--disulphide oxidoreductase DsbE.
     
 0.473
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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