STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1665PFAM: Peptidase M23; KEGG: sal:Sala_0575 peptidase M23B. (395 aa)    
Predicted Functional Partners:
ZMO0417
KEGG: nar:Saro_0700 hypothetical protein.
 
 
 
 0.928
ZMO0192
PFAM: peptidase M48 Ste24p; KEGG: nar:Saro_0230 peptidase M48, Ste24p.
 
 
   0.904
rlmH
Protein of unknown function DUF163; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.831
ZMO1667
TIGRFAM: carboxyl-terminal protease; KEGG: swi:Swit_2547 carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; Belongs to the peptidase S41A family.
  
    0.798
nadD
Cytidylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
 
     0.736
ZMO1657
KEGG: swi:Swit_4507 hypothetical protein.
 
     0.729
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.687
ZMO1668
Hypothetical protein; KEGG: swi:Swit_2548 disulfide bond formation protein DsbB-like protein.
 
     0.675
ZMO0752
KEGG: swi:Swit_0063 hypothetical protein.
  
     0.658
ZMO1636
PFAM: import inner membrane translocase subunit Tim44; KEGG: swi:Swit_3830 import inner membrane translocase, subunit Tim44.
  
     0.622
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.