STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1691PFAM: ribonuclease BN; KEGG: sal:Sala_0656 ribonuclease BN. (340 aa)    
Predicted Functional Partners:
ZMO1692
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: swi:Swit_4769 enoyl-[acyl-carrier-protein] reductase [NADH].
 
     0.806
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.780
ZMO0228
PFAM: polysaccharide biosynthesis protein; KEGG: swi:Swit_0449 polysaccharide biosynthesis protein.
  
     0.695
ZMO1012
KEGG: swi:Swit_4112 hypothetical protein.
  
    0.667
ZMO1690
PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: swi:Swit_4767 heat shock protein DnaJ domain-containing protein.
       0.577
ZMO1319
Hypothetical protein; KEGG: swi:Swit_0407 TPR repeat-containing protein.
  
     0.558
ZMO1641
KEGG: swi:Swit_2339 hypothetical protein.
  
     0.530
ZMO0343
PFAM: aminotransferase class IV; KEGG: eli:ELI_11940 Para-aminobenzoate synthase, component I.
  
     0.516
ZMO0495
PFAM: protein of unknown function DUF490; KEGG: swi:Swit_4828 hypothetical protein.
 
     0.505
ZMO1959
Hypothetical protein; KEGG: eli:ELI_06575 ATPase.
  
     0.492
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.