STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1697Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: mlo:mll7749 hypothetical protein. (114 aa)    
Predicted Functional Partners:
ZMO1696
KEGG: bid:Bind_0951 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
       0.555
ZMO1235
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sal:Sala_0376 ferric uptake regulator family protein; Belongs to the Fur family.
   
  
 0.484
ZMO2033
KEGG: rme:Rmet_3028 transcriptional regulator, XRE family.
   
  
 0.482
ZMO1206
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl01_2570 LysR family transcriptional regulator.
   
  
 0.473
ZMO1336
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdj:Gdia_1169 transcriptional regulator, LysR family.
   
  
 0.469
ZMO0054
PFAM: regulatory protein MarR; KEGG: ppw:PputW619_4520 MarR family transcriptional regulator.
   
  
 0.466
ZMO0153
PFAM: protein of unknown function DUF28; KEGG: swi:Swit_2142 hypothetical protein.
      
 0.460
ZMO0631
Sigma54 specific transcriptional regulator, Fis family; KEGG: swi:Swit_1285 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
   
  
 0.459
ZMO1013
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
      
 0.457
nrdR
ATP-cone domain protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
      
 0.456
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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