STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1733Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: swi:Swit_3588 LysR family transcriptional regulator. (313 aa)    
Predicted Functional Partners:
ZMO0781
KEGG: pmy:Pmen_2204 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding.
  
     0.641
ZMO0471
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_C0187 LysR family transcriptional regulator.
  
     0.611
ZMO1732
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: swi:Swit_3587 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
       0.588
ZMO0675
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: swi:Swit_1196 LysR family transcriptional regulator.
  
     0.577
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
      
 0.563
ZMO1117
KEGG: swi:Swit_0657 glutamate synthase (NADPH) large subunit; PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase.
  
  
 0.514
ZMO1574
Transcriptional regulator, LysR family; KEGG: azc:AZC_3272 regulatory protein; PFAM: regulatory protein LysR; LysR substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.512
hisC
Histidinol-phosphate aminotransferase; Catalyzes the conversion of imidazole acetol phosphate to histidinol phosphate. Can also transaminate aromatic amino acids and histidine in addition to histidinol phosphate. Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
      
 0.457
ZMO1432
PFAM: Fusaric acid resistance protein conserved region; KEGG: bpt:Bpet2606 hypothetical protein.
      
 0.456
ZMO0918
Catalase; KEGG: psp:PSPPH_4565 catalase KatA; PFAM: Catalase domain protein; Belongs to the catalase family.
      
 0.455
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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