STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1872KEGG: sal:Sala_0362 hypothetical protein. (208 aa)    
Predicted Functional Partners:
ZMO1873
KEGG: eli:ELI_03280 glutaredoxin-related protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
     
 0.847
ZMO1874
PFAM: BolA family protein; KEGG: nar:Saro_2520 BolA-like protein; Belongs to the BolA/IbaG family.
     
 0.803
ZMO1875
PFAM: protein of unknown function DUF1476; KEGG: sal:Sala_0355 hypothetical protein.
     
 0.799
nadA
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.793
ZMO1870
TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: sal:Sala_1150 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; Belongs to the NadC/ModD family.
       0.696
ZMO1868
KEGG: swi:Swit_2999 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase.
       0.474
ZMO1869
KEGG: eli:ELI_12675 ribonuclease T2 family protein; Belongs to the RNase T2 family.
       0.474
ZMO0422
KEGG: swi:Swit_2919 BadM/Rrf2 family transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; FeS assembly SUF system regulator; PFAM: protein of unknown function UPF0074.
      
 0.456
ZMO0573
Glutaredoxin, GrxB family; KEGG: gox:GOX1460 glutaredoxin 2; TIGRFAM: glutaredoxin, GrxB family; PFAM: glutaredoxin; Glutathione S-transferase domain; glutaredoxin 2 domain protein.
      
 0.456
ZMO0036
PFAM: protein of unknown function DUF1491; KEGG: swi:Swit_2824 hypothetical protein.
      
 0.455
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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