STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1876KEGG: sal:Sala_2263 hypothetical protein. (162 aa)    
Predicted Functional Partners:
ZMO1978
parB-like partition protein; KEGG: swi:Swit_2849 chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; Belongs to the ParB family.
    
 
 0.805
ZMO1412
PFAM: ROSMUCR transcriptional regulator; KEGG: swi:Swit_2384 MucR family transcriptional regulator.
  
     0.719
ZMO1470
PFAM: Transglycosylase domain protein; KEGG: swi:Swit_1258 hypothetical protein.
  
     0.700
ZMO1102
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: swi:Swit_2675 PAS/PAC sensor signal transduction histidine kinase.
  
 
 
 0.696
ZMO0418
PFAM: protein of unknown function DUF218; KEGG: swi:Swit_3011 hypothetical protein.
  
     0.659
ZMO1762
PFAM: protein of unknown function UPF0102; KEGG: swi:Swit_0572 hypothetical protein; Belongs to the UPF0102 family.
  
     0.652
ZMO1433
KEGG: swi:Swit_2850 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta.
  
     0.604
ZMO0124
KEGG: swi:Swit_3657 ATPase-like protein.
 
   
 0.597
ZMO1504
PFAM: protein of unknown function DUF1321; KEGG: swi:Swit_2716 hypothetical protein.
  
     0.526
ZMO1875
PFAM: protein of unknown function DUF1476; KEGG: sal:Sala_0355 hypothetical protein.
 
     0.520
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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