STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1885PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gox:GOX2684 NAD(P)H-dependent 2-cyclohexen-1-one reductase. (358 aa)    
Predicted Functional Partners:
ZMO1480
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sal:Sala_0178 electron transfer flavoprotein beta-subunit.
  
 
 0.860
ZMO1479
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: swi:Swit_3195 electron transfer flavoprotein, alpha subunit-like protein.
   
 
 0.721
ZMO1254
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: swi:Swit_3991 periplasmic protein thiol--disulphide oxidoreductase DsbE.
   
 
 0.514
ZMO0021
PFAM: protein of unknown function DUF162; KEGG: gox:GOX1357 putative electron transport protein.
      
 0.503
ZMO1334
PFAM: YceI family protein; KEGG: gdj:Gdia_2180 YceI family protein; Belongs to the UPF0312 family.
     
 0.496
ZMO0221
PFAM: transcription factor CarD; KEGG: swi:Swit_3537 CarD family transcriptional regulator.
   
    0.493
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.482
proC-2
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
  
  
 0.480
ZMO0144
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
 
    0.478
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
    
 
 0.475
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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