STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1941Type IV secretory pathway protease TraF-like protein; KEGG: pap:PSPA7_3727 conjugal transfer protein. (251 aa)    
Predicted Functional Partners:
ZMO1940
KEGG: pau:PA14_31090 hypothetical protein.
     0.987
ZMO1943
KEGG: rso:RSc2601 hypothetical protein.
     0.986
ZMO2037
KEGG: bpt:Bpet2187 hypothetical protein.
     0.986
ZMO1937
KEGG: pap:PSPA7_3732 hypothetical protein.
 
    0.780
ZMO2035
KEGG: rme:Rmet_3024 conserved hypothetical replication initiator and transcription repressor protein.
 
     0.778
ZMO2034
KEGG: aav:Aave_0683 putative lipoprotein.
  
     0.775
ZMO1930
PFAM: integrase family protein; KEGG: xac:XAC2222 phage-related integrase; Belongs to the 'phage' integrase family.
 
   
 0.773
panC
Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.640
ZMO1299
KEGG: pzu:PHZ_c1125 capsular polysaccharide biosynthesis protein.
      
 0.604
ZMO1300
KEGG: shn:Shewana3_4096 hypothetical protein.
      
 0.591
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.