STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1945KEGG: pde:Pden_1448 phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein. (295 aa)    
Predicted Functional Partners:
ZMO1946
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_6431 short-chain dehydrogenase/reductase SDR.
       0.675
ZMO1944
PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bch:Bcen2424_1984 GntR family transcriptional regulator.
       0.545
ZMO1947
KEGG: reu:Reut_B5866 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP.
  
    0.542
ZMO1948
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pap:PSPA7_4026 hypothetical protein.
       0.517
ZMO1949
KEGG: ppg:PputGB1_2187 ribosyldihydronicotinamide dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone).
       0.497
ZMO1950
PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_2769 aminotransferase.
       0.497
ZMO2038
PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_1073 hypothetical protein.
       0.445
ZMO1951
PFAM: Dimethylmenaquinone methyltransferase; KEGG: hau:Haur_5088 demethylmenaquinone methyltransferase.
       0.437
ZMO2039
KEGG: gsu:GSU2400 hypothetical protein.
       0.437
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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