STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1950PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_2769 aminotransferase. (394 aa)    
Predicted Functional Partners:
ZMO1949
KEGG: ppg:PputGB1_2187 ribosyldihydronicotinamide dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone).
       0.773
ZMO1948
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pap:PSPA7_4026 hypothetical protein.
       0.752
ZMO2038
PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_1073 hypothetical protein.
 
     0.732
ZMO1947
KEGG: reu:Reut_B5866 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP.
       0.726
ZMO1951
PFAM: Dimethylmenaquinone methyltransferase; KEGG: hau:Haur_5088 demethylmenaquinone methyltransferase.
 
     0.717
ZMO2039
KEGG: gsu:GSU2400 hypothetical protein.
       0.668
ZMO1946
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_6431 short-chain dehydrogenase/reductase SDR.
 
   0.649
glmS
Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
      
 0.584
ZMO1117
KEGG: swi:Swit_0657 glutamate synthase (NADPH) large subunit; PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase.
     
 0.579
ZMO0859
PFAM: aminotransferase class V; KEGG: swi:Swit_0052 aminotransferase, class V.
   
 
 0.537
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.