STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1959Hypothetical protein; KEGG: eli:ELI_06575 ATPase. (1015 aa)    
Predicted Functional Partners:
ZMO1676
PFAM: protein of unknown function DUF721; KEGG: swi:Swit_4691 hypothetical protein.
 
     0.763
ZMO0228
PFAM: polysaccharide biosynthesis protein; KEGG: swi:Swit_0449 polysaccharide biosynthesis protein.
  
     0.752
ZMO0277
PFAM: protein of unknown function DUF1239; KEGG: swi:Swit_2904 hypothetical protein.
  
     0.750
ZMO1012
KEGG: swi:Swit_4112 hypothetical protein.
 
    0.737
ZMO1433
KEGG: swi:Swit_2850 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta.
  
     0.726
ZMO1657
KEGG: swi:Swit_4507 hypothetical protein.
  
   
 0.726
ZMO1319
Hypothetical protein; KEGG: swi:Swit_0407 TPR repeat-containing protein.
  
     0.722
ZMO1909
PFAM: protein of unknown function DUF177; KEGG: swi:Swit_1929 hypothetical protein.
 
    0.699
ZMO1607
PFAM: Septum formation initiator; KEGG: swi:Swit_1221 septum formation initiator.
  
     0.687
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.681
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.